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LOC110092725 glucomannan 4-beta-mannosyltransferase 9 [ Dendrobium catenatum ]

Gene ID: 110092725, updated on 22-Oct-2023

Summary

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Gene symbol
LOC110092725
Gene description
glucomannan 4-beta-mannosyltransferase 9
Locus tag
MA16_Dca013045
Gene type
protein coding
RefSeq status
MODEL
Organism
Dendrobium catenatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Also known as
CSLA9
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Genomic context

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See LOC110092725 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM160598v2 (GCF_001605985.2) Unplaced Scaffold NW_021318874.1 (770742..779370, complement)
100 previous assembly ASM160598v1 (GCF_001605985.1) Unplaced Scaffold NW_018319435.1 (254683..263304)

NW_021318874.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110092738 Neighboring gene DEAD-box ATP-dependent RNA helicase 5 Neighboring gene peroxiredoxin-2E-1, chloroplastic Neighboring gene uncharacterized LOC110092733

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of genes involved in biosynthesis of mannan polysaccharides in Dendrobium officinale by RNA-seq analysis. He C, et al. Plant Mol Biol, 2015 Jun. PMID 25924595
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dendrobium catenatum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM160598v2 Primary Assembly

Genomic

  1. NW_021318874.1 Reference ASM160598v2 Primary Assembly

    Range
    770742..779370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020817384.2 → XP_020673043.1  glucomannan 4-beta-mannosyltransferase 9

    UniProtKB/TrEMBL
    A0A2I0X120
    Conserved Domains (1) summary
    cd06437
    Location:100 → 336
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
Heading Accession and Version

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