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CHST12 carbohydrate sulfotransferase 12 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110091687, updated on 15-Mar-2024

Summary

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Gene symbol
CHST12
Gene description
carbohydrate sulfotransferase 12
See related
Ensembl:ENSPVIG00000008830
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See CHST12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018151780.1 (45764..55802)

NW_018151780.1Genomic Context describing neighboring genes Neighboring gene cholecystokinin receptor-like Neighboring gene galectin-related inter-fiber protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018151780.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018151780.1 Reference pvi1.1

    Range
    45764..55802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020815889.1 → XP_020671548.1  carbohydrate sulfotransferase 12 isoform X2

    UniProtKB/TrEMBL
    A0A6J0VFC9
    Conserved Domains (1) summary
    pfam03567
    Location:189 → 434
    Sulfotransfer_2; Sulfotransferase family

  2. XM_020815890.1 → XP_020671549.1  carbohydrate sulfotransferase 12 isoform X2

    UniProtKB/TrEMBL
    A0A6J0VFC9
    Conserved Domains (1) summary
    pfam03567
    Location:189 → 434
    Sulfotransfer_2; Sulfotransferase family

  3. XM_020815888.1 → XP_020671547.1  carbohydrate sulfotransferase 12 isoform X2

    UniProtKB/TrEMBL
    A0A6J0VFC9
    Conserved Domains (1) summary
    pfam03567
    Location:189 → 434
    Sulfotransfer_2; Sulfotransferase family

  4. XM_020815886.1 → XP_020671545.1  carbohydrate sulfotransferase 12 isoform X1

    UniProtKB/TrEMBL
    A0A6J0VJ18
    Related
    ENSPVIP00000011239.1, ENSPVIT00000014244.1
    Conserved Domains (1) summary
    pfam03567
    Location:213 → 458
    Sulfotransfer_2; Sulfotransferase family

  5. XM_020815887.1 → XP_020671546.1  carbohydrate sulfotransferase 12 isoform X2

    UniProtKB/TrEMBL
    A0A6J0VFC9
    Conserved Domains (1) summary
    pfam03567
    Location:189 → 434
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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