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LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110091685, updated on 15-Mar-2024

Summary

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Gene symbol
LFNG
Gene description
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSPVIG00000008834
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See LFNG in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018151780.1 (165096..193268)

NW_018151780.1Genomic Context describing neighboring genes Neighboring gene cholecystokinin receptor-like Neighboring gene galectin-related inter-fiber protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018151780.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pattern specification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018151780.1 Reference pvi1.1

    Range
    165096..193268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020815883.1 → XP_020671542.1  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

    UniProtKB/TrEMBL
    A0A6J0VFE0
    Related
    ENSPVIP00000011244.1, ENSPVIT00000014252.1
    Conserved Domains (1) summary
    pfam02434
    Location:135 → 381
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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