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MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110091627, updated on 15-Mar-2024

Summary

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Gene symbol
MDGA2
Gene description
MAM domain containing glycosylphosphatidylinositol anchor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See MDGA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018151768.1 (30663..212441, complement)

NW_018151768.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018151768.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAM domain-containing glycosylphosphatidylinositol anchor protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018151768.1 Reference pvi1.1

    Range
    30663..212441 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020815803.1 → XP_020671462.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 2

    UniProtKB/TrEMBL
    A0A6J0VF61
    Conserved Domains (4) summary
    smart00408
    Location:225 → 290
    IGc2; Immunoglobulin C-2 Type
    pfam00629
    Location:420 → 592
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:113 → 188
    Ig_3; Immunoglobulin domain
    cl28434
    Location:21 → 96
    I-set; Immunoglobulin I-set domain
Nucleotide Protein
Heading Accession and Version

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