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COLEC10 collectin subfamily member 10 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110091299, updated on 15-Mar-2024

Summary

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Gene symbol
COLEC10
Gene description
collectin subfamily member 10
See related
Ensembl:ENSPVIG00000008023
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See COLEC10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018151707.1 (107466..133271, complement)

NW_018151707.1Genomic Context describing neighboring genes Neighboring gene cellular communication network factor 3 Neighboring gene mal, T cell differentiation protein 2 Neighboring gene TNF receptor superfamily member 11b Neighboring gene uncharacterized LOC110091295

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018151707.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collectin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018151707.1 Reference pvi1.1

    Range
    107466..133271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020815372.1 → XP_020671031.1  collectin-10

    UniProtKB/TrEMBL
    A0A6J0VDV8
    Related
    ENSPVIP00000010110.1, ENSPVIT00000012870.1
    Conserved Domains (2) summary
    cd03591
    Location:155 → 270
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:43 → 97
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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