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FADS1 fatty acid desaturase 1 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110086192, updated on 15-Mar-2024

Summary

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Gene symbol
FADS1
Gene description
fatty acid desaturase 1
See related
Ensembl:ENSPVIG00000017386
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See FADS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018151152.1 (518098..547201)

NW_018151152.1Genomic Context describing neighboring genes Neighboring gene RAB3A interacting protein like 1 Neighboring gene transmembrane protein 164 pseudogene Neighboring gene fatty acid desaturase 2 Neighboring gene fatty acid desaturase 1-like Neighboring gene fatty acid desaturase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018151152.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid desaturase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018151152.1 Reference pvi1.1

    Range
    518098..547201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020806984.1 → XP_020662643.1  fatty acid desaturase 1

    UniProtKB/TrEMBL
    A0A6J0URN1
    Related
    ENSPVIP00000023031.1, ENSPVIT00000028490.1
    Conserved Domains (2) summary
    cd03506
    Location:161 → 412
    Delta6-FADS-like; The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases ...
    cl27737
    Location:9 → 439
    CYB5; Cytochrome b involved in lipid metabolism [Energy production and conversion, Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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