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STBD1 starch binding domain 1 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110085265, updated on 15-Mar-2024

Summary

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Gene symbol
STBD1
Gene description
starch binding domain 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See STBD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018151088.1 (863033..869961, complement)

NW_018151088.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110085243 Neighboring gene coiled-coil domain containing 158 Neighboring gene family with sequence similarity 47 member E Neighboring gene scavenger receptor class B member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018151088.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch-binding domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018151088.1 Reference pvi1.1

    Range
    863033..869961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020805262.1 → XP_020660921.1  starch-binding domain-containing protein 1

    UniProtKB/TrEMBL
    A0A6J0UJL8
    Conserved Domains (2) summary
    pfam11679
    Location:42 → 114
    DUF3275; Protein of unknown function (DUF3275)
    cl15347
    Location:192 → 286
    CBM20; The family 20 carbohydrate-binding module (CBM20), also known as the starch-binding domain, is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is ...
Nucleotide Protein
Heading Accession and Version

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