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GDPD3 glycerophosphodiester phosphodiesterase domain containing 3 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110081791, updated on 15-Mar-2024

Summary

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Gene symbol
GDPD3
Gene description
glycerophosphodiester phosphodiesterase domain containing 3
See related
Ensembl:ENSPVIG00000009198
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See GDPD3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150941.1 (703108..712786, complement)

NW_018150941.1Genomic Context describing neighboring genes Neighboring gene T-box transcription factor 6 Neighboring gene yippee like 3 Neighboring gene mitogen-activated protein kinase 3 Neighboring gene coronin 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150941.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerophosphodiester phosphodiesterase domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150941.1 Reference pvi1.1

    Range
    703108..712786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020798797.1 → XP_020654456.1  glycerophosphodiester phosphodiesterase domain-containing protein 3

    UniProtKB/TrEMBL
    A0A6J0U168
    Related
    ENSPVIP00000011827.1, ENSPVIT00000014951.1
    Conserved Domains (1) summary
    cd08612
    Location:14 → 310
    GDPD_GDE4; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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