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HS6ST2 heparan sulfate 6-O-sulfotransferase 2 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110080165, updated on 15-Mar-2024

Summary

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Gene symbol
HS6ST2
Gene description
heparan sulfate 6-O-sulfotransferase 2
See related
Ensembl:ENSPVIG00000024098
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See HS6ST2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150887.1 (2294516..2403947, complement)

NW_018150887.1Genomic Context describing neighboring genes Neighboring gene RAP2C, member of RAS oncogene family Neighboring gene muscleblind like splicing regulator 3 Neighboring gene glypican 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150887.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150887.1 Reference pvi1.1

    Range
    2294516..2403947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020795843.1 → XP_020651502.1  heparan-sulfate 6-O-sulfotransferase 2

    UniProtKB/TrEMBL
    A0A6J0TT52
    Related
    ENSPVIP00000032901.1, ENSPVIT00000040286.1
    Conserved Domains (1) summary
    pfam03567
    Location:29 → 295
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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