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CTBS chitobiase [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110079742, updated on 15-Mar-2024

Summary

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Gene symbol
CTBS
Gene description
chitobiase
See related
Ensembl:ENSPVIG00000019127
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See CTBS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150874.1 (1147405..1159895)

NW_018150874.1Genomic Context describing neighboring genes Neighboring gene vitellogenin-2-like Neighboring gene vitellogenin-2-like Neighboring gene di-N-acetylchitobiase-like Neighboring gene spermatogenesis associated 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150874.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
di-N-acetylchitobiase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150874.1 Reference pvi1.1

    Range
    1147405..1159895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020795044.1 → XP_020650703.1  di-N-acetylchitobiase isoform X1

    UniProtKB/TrEMBL
    A0A6J0TT28
    Conserved Domains (1) summary
    cd02875
    Location:31 → 369
    GH18_chitobiase; Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. ...

  2. XM_020795045.1 → XP_020650704.1  di-N-acetylchitobiase isoform X2

    UniProtKB/TrEMBL
    A0A6J0TXD4
    Related
    ENSPVIP00000025554.1, ENSPVIT00000031516.1
    Conserved Domains (1) summary
    cd02875
    Location:31 → 369
    GH18_chitobiase; Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. ...
Nucleotide Protein
Heading Accession and Version

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