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SDHD succinate dehydrogenase complex subunit D [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110079388, updated on 26-Jun-2024

Summary

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Gene symbol
SDHD
Gene description
succinate dehydrogenase complex subunit D
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See SDHD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150700.1 (6963705..6969710)

NW_018150700.1Genomic Context describing neighboring genes Neighboring gene PIH1 domain containing 2 Neighboring gene NKAP domain containing 1 Neighboring gene beta-carotene oxygenase 2 Neighboring gene uncharacterized LOC110079396 Neighboring gene 6-pyruvoyl tetrahydrobiopterin synthase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150700.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquinone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150700.1 Reference pvi1.1

    Range
    6963705..6969710
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020794421.1 → XP_020650080.1  succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

    UniProtKB/TrEMBL
    A0A6J0TSU0
    Conserved Domains (1) summary
    cd03496
    Location:42 → 139
    SQR_TypeC_CybS; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Eukaryotic SQRs reduce high potential quinones such as ubiquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric ...
Nucleotide Protein
Heading Accession and Version

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