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ZBTB6 zinc finger and BTB domain containing 6 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110078869, updated on 15-Mar-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
See related
Ensembl:ENSPVIG00000025701
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150853.1 (711297..716234, complement)

NW_018150853.1Genomic Context describing neighboring genes Neighboring gene phosducin like Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene uncharacterized LOC110078839 Neighboring gene zinc finger and BTB domain containing 26

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150853.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150853.1 Reference pvi1.1

    Range
    711297..716234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020793438.1 → XP_020649097.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A6J0TNM5
    Conserved Domains (3) summary
    COG5048
    Location:235 → 401
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:330 → 350
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:23 → 127
    BTB; BTB/POZ domain

  2. XM_020793437.1 → XP_020649096.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A6J0TNM5
    Related
    ENSPVIP00000035144.1, ENSPVIT00000043059.1
    Conserved Domains (3) summary
    COG5048
    Location:235 → 401
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:330 → 350
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:23 → 127
    BTB; BTB/POZ domain

  3. XM_020793439.1 → XP_020649098.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A6J0TNM5
    Conserved Domains (3) summary
    COG5048
    Location:235 → 401
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:330 → 350
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:23 → 127
    BTB; BTB/POZ domain
Nucleotide Protein
Heading Accession and Version

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