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SLC35F3 solute carrier family 35 member F3 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110075521, updated on 15-Mar-2024

Summary

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Gene symbol
SLC35F3
Gene description
solute carrier family 35 member F3
See related
Ensembl:ENSPVIG00000018235
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See SLC35F3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150698.1 (2174251..2233161)

NW_018150698.1Genomic Context describing neighboring genes Neighboring gene DNA mismatch repair protein Msh6-like Neighboring gene uncharacterized LOC110075528 Neighboring gene cytochrome c oxidase assembly factor 6 homolog Neighboring gene TAR (HIV-1) RNA binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150698.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in thiamine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative thiamine transporter SLC35F3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150698.1 Reference pvi1.1

    Range
    2174251..2233161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020786881.1 → XP_020642540.1  putative thiamine transporter SLC35F3 isoform X1

    UniProtKB/TrEMBL
    A0A6J0T696
    Related
    ENSPVIP00000024187.1, ENSPVIT00000029886.1
    Conserved Domains (2) summary
    COG0697
    Location:318 → 526
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
    pfam00892
    Location:229 → 384
    EamA; EamA-like transporter family

  2. XM_020786890.1 → XP_020642549.1  putative thiamine transporter SLC35F3 isoform X2

    UniProtKB/TrEMBL
    A0A6J0T8W7
    Conserved Domains (2) summary
    pfam00892
    Location:229 → 384
    EamA; EamA-like transporter family
    cl28280
    Location:324 → 416
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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