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LYPD6B LY6/PLAUR domain containing 6B [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110074912, updated on 15-Mar-2024

Summary

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Gene symbol
LYPD6B
Gene description
LY6/PLAUR domain containing 6B
See related
Ensembl:ENSPVIG00000018158
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See LYPD6B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150763.1 (2933017..2978763, complement)

NW_018150763.1Genomic Context describing neighboring genes Neighboring gene metabolism of cobalamin associated D Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene kinesin family member 5C Neighboring gene enhancer of polycomb homolog 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150763.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine receptor regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ly6/PLAUR domain-containing protein 6B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150763.1 Reference pvi1.1

    Range
    2933017..2978763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020785662.1 → XP_020641321.1  ly6/PLAUR domain-containing protein 6B isoform X2

    UniProtKB/TrEMBL
    A0A6J0SY51
    Related
    ENSPVIP00000024068.1, ENSPVIT00000029742.1
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 144
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

  2. XM_020785660.1 → XP_020641319.1  ly6/PLAUR domain-containing protein 6B isoform X1

    UniProtKB/TrEMBL
    A0A6J0T5F0
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 154
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

  3. XM_020785661.1 → XP_020641320.1  ly6/PLAUR domain-containing protein 6B isoform X1

    UniProtKB/TrEMBL
    A0A6J0T5F0
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 154
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

  4. XM_020785663.1 → XP_020641322.1  ly6/PLAUR domain-containing protein 6B isoform X3

    UniProtKB/TrEMBL
    A0A6J0SY54
    Conserved Domains (1) summary
    cl10471
    Location:40 → 115
    LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
Nucleotide Protein
Heading Accession and Version

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