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GTDC1 glycosyltransferase like domain containing 1 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110074223, updated on 15-Mar-2024

Summary

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Gene symbol
GTDC1
Gene description
glycosyltransferase like domain containing 1
See related
Ensembl:ENSPVIG00000005323
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See GTDC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150751.1 (2631577..2935382, complement)

NW_018150751.1Genomic Context describing neighboring genes Neighboring gene kynureninase Neighboring gene Rho GTPase activating protein 15 Neighboring gene zinc finger E-box binding homeobox 2 Neighboring gene uncharacterized LOC110074220

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150751.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase-like domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150751.1 Reference pvi1.1

    Range
    2631577..2935382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020784221.1 → XP_020639880.1  glycosyltransferase-like domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6J0SYM5
    Conserved Domains (2) summary
    COG0438
    Location:288 → 462
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:25 → 187
    DUF3524; Domain of unknown function (DUF3524)

  2. XM_020784222.1 → XP_020639881.1  glycosyltransferase-like domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J0T1F9
    Conserved Domains (2) summary
    COG0438
    Location:273 → 458
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:10 → 172
    DUF3524; Domain of unknown function (DUF3524)

  3. XM_020784225.1 → XP_020639884.1  glycosyltransferase-like domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J0T1F9
    Conserved Domains (2) summary
    COG0438
    Location:273 → 458
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:10 → 172
    DUF3524; Domain of unknown function (DUF3524)

  4. XM_020784223.1 → XP_020639882.1  glycosyltransferase-like domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J0T1F9
    Conserved Domains (2) summary
    COG0438
    Location:273 → 458
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:10 → 172
    DUF3524; Domain of unknown function (DUF3524)

  5. XM_020784224.1 → XP_020639883.1  glycosyltransferase-like domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J0T1F9
    Related
    ENSPVIP00000006442.1, ENSPVIT00000008294.1
    Conserved Domains (2) summary
    COG0438
    Location:273 → 458
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:10 → 172
    DUF3524; Domain of unknown function (DUF3524)

  6. XM_020784227.1 → XP_020639886.1  glycosyltransferase-like domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SYN0
    Related
    ENSPVIP00000006446.1, ENSPVIT00000008299.1
    Conserved Domains (2) summary
    COG0438
    Location:213 → 398
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:2 → 112
    DUF3524; Domain of unknown function (DUF3524)

  7. XM_020784226.1 → XP_020639885.1  glycosyltransferase-like domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SYN0
    Conserved Domains (2) summary
    COG0438
    Location:213 → 398
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:2 → 112
    DUF3524; Domain of unknown function (DUF3524)
Nucleotide Protein
Heading Accession and Version

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