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TMTC2 transmembrane O-mannosyltransferase targeting cadherins 2 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110070154, updated on 15-Mar-2024

Summary

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Gene symbol
TMTC2
Gene description
transmembrane O-mannosyltransferase targeting cadherins 2
See related
Ensembl:ENSPVIG00000023902
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150713.1 (5889848..6101105, complement)

NW_018150713.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 15 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene methyltransferase like 25 Neighboring gene coiled-coil domain containing 59

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150713.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein 2
Names
transmembrane and tetratricopeptide repeat containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150713.1 Reference pvi1.1

    Range
    5889848..6101105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020777798.1 → XP_020633457.1  transmembrane and TPR repeat-containing protein 2

    UniProtKB/TrEMBL
    A0A6J0SB18
    Related
    ENSPVIP00000032617.1, ENSPVIT00000039944.1
    Conserved Domains (3) summary
    COG0457
    Location:437 → 707
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:522 → 550
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:243 → 316
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein
Heading Accession and Version

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