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CD248 CD248 molecule [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110070041, updated on 15-Mar-2024

Summary

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Gene symbol
CD248
Gene description
CD248 molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See CD248 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018151848.1 (138366..139472)

NW_018151848.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase theta-1-like Neighboring gene cofilin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018151848.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endosialin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018151848.1 Reference pvi1.1

    Range
    138366..139472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020777637.1 → XP_020633296.1  endosialin

    UniProtKB/TrEMBL
    A0A6J0SA83
    Conserved Domains (3) summary
    smart00179
    Location:77 → 116
    EGF_CA; Calcium-binding EGF-like domain
    pfam12662
    Location:16 → 39
    cEGF; Complement Clr-like EGF-like
    cl26464
    Location:119 → 297
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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