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gtpbp3 GTP binding protein 3, mitochondrial [ Labrus bergylta (ballan wrasse) ]

Gene ID: 110001109, updated on 10-Oct-2024

Summary

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Gene symbol
gtpbp3
Gene description
GTP binding protein 3, mitochondrial
See related
Ensembl:ENSLBEG00000027113
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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See gtpbp3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 6 NC_089200.1 (11245961..11263551, complement)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114428.1 (1432882..1449541, complement)

Chromosome 6 - NC_089200.1Genomic Context describing neighboring genes Neighboring gene BRISC and BRCA1 A complex member 1 Neighboring gene plasmalemma vesicle associated protein b Neighboring gene anoctamin 8b Neighboring gene DET1 and DDB1 associated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA modification GTPase GTPBP3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089200.1 Reference fLabBer1.1

    Range
    11245961..11263551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020656546.3 → XP_020512202.1  tRNA modification GTPase GTPBP3, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3Q3GXS3
    Related
    ENSLBEP00000036239.1
    Conserved Domains (1) summary
    PRK05291
    Location:42 → 514
    trmE; tRNA modification GTPase TrmE; Reviewed

  2. XM_065955728.1 → XP_065811800.1  tRNA modification GTPase GTPBP3, mitochondrial isoform X1

Nucleotide Protein
Heading Accession and Version

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