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gtpbp4 GTP binding protein 4 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109999619, updated on 12-Sep-2024

Summary

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Gene symbol
gtpbp4
Gene description
GTP binding protein 4
See related
Ensembl:ENSLBEG00000021419
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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See gtpbp4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 4 NC_089198.1 (5063216..5072119, complement)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114992.1 (6878..15794)

Chromosome 4 - NC_089198.1Genomic Context describing neighboring genes Neighboring gene double-stranded RNA-specific editase B2-like Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene WD repeat-containing protein 37 Neighboring gene uncharacterized LOC114921395 Neighboring gene la-related protein 4B-like Neighboring gene tripartite motif-containing protein 16-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar GTP-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089198.1 Reference fLabBer1.1

    Range
    5063216..5072119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020654709.3 → XP_020510365.1  nucleolar GTP-binding protein 1

    UniProtKB/TrEMBL
    A0A3Q3N3B5
    Related
    ENSLBEP00000028300.1
    Conserved Domains (2) summary
    COG1084
    Location:5 → 345
    Nog1; GTP-binding protein, GTP1/Obg family [General function prediction only]
    pfam08155
    Location:396 → 446
    NOGCT; NOGCT (NUC087) domain
Nucleotide Protein
Heading Accession and Version

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