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rasef2 RAS and EF-hand domain containing 2 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109999300, updated on 26-Jun-2024

Summary

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Gene symbol
rasef2
Gene description
RAS and EF-hand domain containing 2
See related
Ensembl:ENSLBEG00000006690
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Also known as
zgc:162879
Orthologs
zebrafish all
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Genomic context

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See rasef2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 7 NC_089201.1 (28613284..28625519, complement)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114964.1 (115742..127608)

Chromosome 7 - NC_089201.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II elongation factor ELL Neighboring gene peroxisomal biogenesis factor 11 alpha Neighboring gene FKBP prolyl isomerase 16 Neighboring gene uncharacterized LOC114921367 Neighboring gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba Neighboring gene zinc finger protein 710a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras and EF-hand domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089201.1 Reference fLabBer1.1

    Range
    28613284..28625519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020654322.3 → XP_020509978.2  ras and EF-hand domain-containing protein

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases