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septin7b septin 7b [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109998693, updated on 26-Jun-2024

Summary

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Gene symbol
septin7b
Gene description
septin 7b
See related
Ensembl:ENSLBEG00000007109
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Also known as
sept7b
Orthologs
zebrafish all
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Genomic context

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See septin7b in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 8 NC_089202.1 (22740858..22757544)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114917.1 (252691..271634, complement)

Chromosome 8 - NC_089202.1Genomic Context describing neighboring genes Neighboring gene retinoic acid receptor beta Neighboring gene NIMA-related kinase 10 Neighboring gene protachykinin Neighboring gene uncharacterized LOC109998697

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin 7b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089202.1 Reference fLabBer1.1

    Range
    22740858..22757544
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029281117.2 → XP_029136950.2  septin 7b isoform X1

  2. XM_065958200.1 → XP_065814272.1  septin 7b isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases