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LOC109998307 obg-like ATPase 1 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109998307, updated on 26-Jun-2024

Summary

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Gene symbol
LOC109998307
Gene description
obg-like ATPase 1
See related
Ensembl:ENSLBEG00000018929
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
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Genomic context

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See LOC109998307 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 18 NC_089212.1 (21416017..21421829)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114889.1 (178471..184232, complement)

Chromosome 18 - NC_089212.1Genomic Context describing neighboring genes Neighboring gene SUMO specific peptidase 2 Neighboring gene transformer-2 protein homolog alpha Neighboring gene transcription factor Sp3 Neighboring gene UDP-glucose glycoprotein glucosyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
obg-like ATPase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089212.1 Reference fLabBer1.1

    Range
    21416017..21421829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020653099.3 → XP_020508755.1  obg-like ATPase 1

    UniProtKB/TrEMBL
    A0A3Q3G114, A0A3Q3G131
    Related
    ENSLBEP00000024788.1
    Conserved Domains (1) summary
    PTZ00258
    Location:1 → 391
    PTZ00258; GTP-binding protein; Provisional
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases