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sar1aa secretion associated, Ras related GTPase 1Aa [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109996047, updated on 26-Jun-2024

Summary

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Gene symbol
sar1aa
Gene description
secretion associated, Ras related GTPase 1Aa
See related
Ensembl:ENSLBEG00000016945
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
zebrafish all
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Genomic context

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See sar1aa in Genome Data Viewer
Location:
chromosome: 21
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 21 NC_089215.1 (8444768..8450278)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114764.1 (79300..84805, complement)

Chromosome 21 - NC_089215.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 20 Neighboring gene inorganic pyrophosphatase 1a Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 Neighboring gene activating signal cointegrator 1 complex subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein exit from endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of COPII vesicle coating IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small COPII coat GTPase SAR1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089215.1 Reference fLabBer1.1

    Range
    8444768..8450278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020649988.2 → XP_020505644.1  small COPII coat GTPase SAR1B

    UniProtKB/TrEMBL
    A0A3Q3MNS5
    Related
    ENSLBEP00000022065.1
    Conserved Domains (1) summary
    cd00879
    Location:3 → 197
    Sar1; Sar1 is an essential component of COPII vesicle coats

  2. XM_020649989.3 → XP_020505645.1  small COPII coat GTPase SAR1B

    UniProtKB/TrEMBL
    A0A3Q3MNS5
    Conserved Domains (1) summary
    cd00879
    Location:3 → 197
    Sar1; Sar1 is an essential component of COPII vesicle coats
Nucleotide Protein
Heading Accession and Version

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