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LOC109994521 septin-8-A [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109994521, updated on 1-Aug-2024

Summary

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Gene symbol
LOC109994521
Gene description
septin-8-A
See related
Ensembl:ENSLBEG00000026898
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
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Genomic context

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See LOC109994521 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 9 NC_089203.1 (12706609..12715202)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114707.1 (653618..662127)

Chromosome 9 - NC_089203.1Genomic Context describing neighboring genes Neighboring gene growth differentiation factor 9 Neighboring gene sosondowah ankyrin repeat domain family member Ab Neighboring gene cyclin G1 Neighboring gene NudC domain containing 2 Neighboring gene gamma-aminobutyric acid type A receptor subunit alpha6a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin-8-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089203.1 Reference fLabBer1.1

    Range
    12706609..12715202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065958511.1 → XP_065814583.1  septin-8-A isoform X2

    UniProtKB/TrEMBL
    A0A3Q3GPA2, A0A3Q3GPB4

  2. XM_020647891.2 → XP_020503547.1  septin-8-A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3GPB4, A0A3Q3GYP5
    Related
    ENSLBEP00000035873.1
    Conserved Domains (1) summary
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family
Nucleotide Protein
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