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eefsec eukaryotic elongation factor, selenocysteine-tRNA-specific [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109993777, updated on 26-Jun-2024

Summary

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Gene symbol
eefsec
Gene description
eukaryotic elongation factor, selenocysteine-tRNA-specific
See related
Ensembl:ENSLBEG00000017908
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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See eefsec in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 5 NC_089199.1 (15240115..15249828)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114680.1 (267416..278058, complement)

Chromosome 5 - NC_089199.1Genomic Context describing neighboring genes Neighboring gene musculoskeletal, embryonic nuclear protein 1a Neighboring gene RuvB-like AAA ATPase 1 Neighboring gene GATA binding protein 2b Neighboring gene fibroleukin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in selenocysteine incorporation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
selenocysteine-specific elongation factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089199.1 Reference fLabBer1.1

    Range
    15240115..15249828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020646849.3 → XP_020502505.2  selenocysteine-specific elongation factor

Nucleotide Protein
Heading Accession and Version

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