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ehd3 EH-domain containing 3 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109990068, updated on 26-Jun-2024

Summary

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Gene symbol
ehd3
Gene description
EH-domain containing 3
See related
Ensembl:ENSLBEG00000009464
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
zebrafish all
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Genomic context

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See ehd3 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 15 NC_089209.1 (16381337..16398259)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114590.1 (894945..911501)

Chromosome 15 - NC_089209.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 23 Neighboring gene interleukin 20 receptor, alpha Neighboring gene monocyte chemotactic protein 1B Neighboring gene uncharacterized LOC109990046

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EH domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089209.1 Reference fLabBer1.1

    Range
    16381337..16398259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020642039.3 → XP_020497695.1  EH domain-containing protein 3

    UniProtKB/TrEMBL
    A0A3Q3EY73
    Related
    ENSLBEP00000012323.1
    Conserved Domains (3) summary
    smart00027
    Location:437 → 530
    EH; Eps15 homology domain
    cd09913
    Location:59 → 299
    EHD; Eps15 homology domain (EHD), C-terminal domain
    pfam16880
    Location:36 → 55
    EHD_N; N-terminal EH-domain containing protein
Nucleotide Protein
Heading Accession and Version

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