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cracr2aa calcium release activated channel regulator 2Aa [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109988308, updated on 12-Sep-2024

Summary

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Gene symbol
cracr2aa
Gene description
calcium release activated channel regulator 2Aa
See related
Ensembl:ENSLBEG00000010713
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Also known as
cracr2a
Orthologs
zebrafish all
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Genomic context

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See cracr2aa in Genome Data Viewer
Location:
chromosome: 7
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 7 NC_089201.1 (5341542..5366288, complement)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114550.1 (1070690..1093514)

Chromosome 7 - NC_089201.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 33b Neighboring gene protein arginine N-methyltransferase 8-B Neighboring gene transmembrane O-mannosyltransferase targeting cadherins 2b Neighboring gene protein FAM180A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EF-hand calcium-binding domain-containing protein 4B
Names
calcium release activated channel regulator 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089201.1 Reference fLabBer1.1

    Range
    5341542..5366288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020639753.3 → XP_020495409.1  EF-hand calcium-binding domain-containing protein 4B

    UniProtKB/TrEMBL
    A0A3Q3LZC7
    Related
    ENSLBEP00000013845.1
    Conserved Domains (3) summary
    cd00154
    Location:524 → 682
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    pfam13499
    Location:40 → 101
    EF-hand_7; EF-hand domain pair
    cl25732
    Location:174 → 371
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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