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rab13 RAB13, member RAS oncogene family [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109986496, updated on 26-Jun-2024

Summary

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Gene symbol
rab13
Gene description
RAB13, member RAS oncogene family
See related
Ensembl:ENSLBEG00000026779
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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See rab13 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 8 NC_089202.1 (12791975..12797634)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114512.1 (531630..537252, complement)

Chromosome 8 - NC_089202.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136179844 Neighboring gene ribosomal protein S27 Neighboring gene family with sequence similarity 189 member B Neighboring gene farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi vesicle fusion to target membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein kinase A signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking involved in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089202.1 Reference fLabBer1.1

    Range
    12791975..12797634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020637168.3 → XP_020492824.1  ras-related protein Rab-13

    UniProtKB/TrEMBL
    A0A3Q3GNU7
    Related
    ENSLBEP00000035702.1
    Conserved Domains (1) summary
    cd01867
    Location:6 → 172
    Rab8_Rab10_Rab13_like; Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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