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LOC109981979 ras-related protein Rab-18 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109981979, updated on 26-Jun-2024

Summary

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Gene symbol
LOC109981979
Gene description
ras-related protein Rab-18
See related
Ensembl:ENSLBEG00000005861
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Also known as
rab18
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Genomic context

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See LOC109981979 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 20 NC_089214.1 (20960766..20973378, complement)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114452.1 (1117350..1130078)

Chromosome 20 - NC_089214.1Genomic Context describing neighboring genes Neighboring gene outer dynein arm docking complex subunit 2 Neighboring gene mohawk homeobox a Neighboring gene integrin, beta 1a Neighboring gene neuropilin 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-18
Names
RAB18, member RAS oncogene family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089214.1 Reference fLabBer1.1

    Range
    20960766..20973378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020631001.3 → XP_020486657.1  ras-related protein Rab-18

    UniProtKB/TrEMBL
    A0A3Q3LF81
    Related
    ENSLBEP00000007590.1
    Conserved Domains (1) summary
    cd01863
    Location:9 → 169
    Rab18; Rab GTPase family 18 (Rab18)

RNA

  1. XR_010664850.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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