U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rab22a RAB22A, member RAS oncogene family [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109980848, updated on 26-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
rab22a
Gene description
RAB22A, member RAS oncogene family
See related
Ensembl:ENSLBEG00000003235
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See rab22a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 5 NC_089199.1 (6591891..6605600, complement)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114440.1 (1607540..1618028, complement)

Chromosome 5 - NC_089199.1Genomic Context describing neighboring genes Neighboring gene adenomatosis polyposis coli down-regulated 1-like Neighboring gene vesicle-associated membrane protein-associated protein B/C Neighboring gene protein phosphatase 4, regulatory subunit 1-like Neighboring gene pre-miRNA 5'-monophosphate methyltransferase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ras-related protein Rab-22A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089199.1 Reference fLabBer1.1

    Range
    6591891..6605600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020629395.3 → XP_020485051.1  ras-related protein Rab-22A

    UniProtKB/TrEMBL
    A0A3Q3EA73
    Related
    ENSLBEP00000004212.1
    Conserved Domains (1) summary
    cd01860
    Location:5 → 167
    Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.