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si:dkeyp-23e4.3 rho GTPase-activating protein 7-like [ Monopterus albus (swamp eel) ]

Gene ID: 109968718, updated on 14-Mar-2024

Summary

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Gene symbol
si:dkeyp-23e4.3
Gene description
rho GTPase-activating protein 7-like
See related
Ensembl:ENSMALG00000021371
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
zebrafish all
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Genomic context

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See si:dkeyp-23e4.3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018128039.1 (511518..537599, complement)

NW_018128039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109968708 Neighboring gene arginyl-tRNA synthetase 1 Neighboring gene sarcoglycan, delta (dystrophin-associated glycoprotein)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018128039.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018128039.1 Reference M_albus_1.0 Primary Assembly

    Range
    511518..537599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020615197.1 → XP_020470853.1  rho GTPase-activating protein 7-like

    UniProtKB/TrEMBL
    A0A3Q3RBF4
    Related
    ENSMALP00000030942.1, ENSMALT00000031488.1
    Conserved Domains (3) summary
    cl02570
    Location:802 → 1019
    RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...
    cl14643
    Location:1059 → 1111
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
    cl15755
    Location:21 → 84
    SAM_superfamily; SAM (Sterile alpha motif )
Nucleotide Protein
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