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cwc15 CWC15 spliceosome associated protein homolog [ Monopterus albus (swamp eel) ]

Gene ID: 109959514, updated on 14-Mar-2024

Summary

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Gene symbol
cwc15
Gene description
CWC15 spliceosome associated protein homolog
See related
Ensembl:ENSMALG00000019325
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
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Genomic context

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See cwc15 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127919.1 (2155596..2158187, complement)

NW_018127919.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 76 member B Neighboring gene myotubularin related protein 2 Neighboring gene sciellin-like Neighboring gene uncharacterized LOC109959491 Neighboring gene proteolipid protein 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018127919.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spliceosome-associated protein CWC15 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127919.1 Reference M_albus_1.0 Primary Assembly

    Range
    2155596..2158187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020598947.1 → XP_020454603.1  spliceosome-associated protein CWC15 homolog

    UniProtKB/TrEMBL
    A0A3Q3KFV7
    Related
    ENSMALP00000027998.1, ENSMALT00000028512.1
    Conserved Domains (1) summary
    pfam04889
    Location:1 → 238
    Cwf_Cwc_15; Cwf15/Cwc15 cell cycle control protein

  2. XM_020598946.1 → XP_020454602.1  spliceosome-associated protein CWC15 homolog

    UniProtKB/TrEMBL
    A0A3Q3KFV7
    Conserved Domains (1) summary
    pfam04889
    Location:1 → 238
    Cwf_Cwc_15; Cwf15/Cwc15 cell cycle control protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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