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hs6st2 heparan sulfate 6-O-sulfotransferase 2 [ Monopterus albus (swamp eel) ]

Gene ID: 109957946, updated on 14-Mar-2024

Summary

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Gene symbol
hs6st2
Gene description
heparan sulfate 6-O-sulfotransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
zebrafish all
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Genomic context

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See hs6st2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127882.1 (6157432..6162197, complement)

NW_018127882.1Genomic Context describing neighboring genes Neighboring gene RAP2C, member of RAS oncogene family Neighboring gene muscleblind-like splicing regulator 3 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene Transmembrane protein 179-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018127882.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127882.1 Reference M_albus_1.0 Primary Assembly

    Range
    6157432..6162197 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020596209.1 → XP_020451865.1  heparan-sulfate 6-O-sulfotransferase 2-like isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:101 → 374
    Sulfotransfer_2; Sulfotransferase family

  2. XM_020596224.1 → XP_020451880.1  heparan-sulfate 6-O-sulfotransferase 2-like isoform X3

    Conserved Domains (1) summary
    pfam03567
    Location:101 → 365
    Sulfotransfer_2; Sulfotransferase family

  3. XM_020596217.1 → XP_020451873.1  heparan-sulfate 6-O-sulfotransferase 2-like isoform X2

    Conserved Domains (1) summary
    pfam03567
    Location:101 → 366
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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