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LOC109950879 uncharacterized LOC109950879 [ Prunus persica (peach) ]

Gene ID: 109950879, updated on 9-Nov-2023

Summary

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Gene symbol
LOC109950879
Gene description
uncharacterized LOC109950879
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC109950879 in Genome Data Viewer
Location:
chromosome: G8
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G8 NC_034016.1 (13673161..13676883)

Chromosome G8 - NC_034016.1Genomic Context describing neighboring genes Neighboring gene polyol transporter 5 Neighboring gene polyol transporter 5 Neighboring gene polyol transporter 5 Neighboring gene cytochrome c biogenesis protein CCS1, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034016.1 Chromosome G8 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA-DNA hybrid ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA integration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC109950879

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034016.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    13673161..13676883
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020571028.1 → XP_020426617.1  uncharacterized protein LOC109950879

    Conserved Domains (4) summary
    cd01647
    Location:134 → 311
    RT_LTR; Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the replication of ...
    cd09274
    Location:406 → 506
    RNase_HI_RT_Ty3; Ty3/Gypsy family of RNase HI in long-term repeat retroelements
    cd09279
    Location:554 → 679
    RNase_HI_like; RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI
    pfam00665
    Location:950 → 1061
    rve; Integrase core domain
Nucleotide Protein
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