U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109950872 mediator of RNA polymerase II transcription subunit 25 [ Prunus persica (peach) ]

Gene ID: 109950872, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109950872
Gene description
mediator of RNA polymerase II transcription subunit 25
Locus tag
PRUPE_1G306600
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109950872 in Genome Data Viewer
Location:
chromosome: G1
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G1 NC_034009.1 (29969842..29979396)

Chromosome G1 - NC_034009.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18789668 Neighboring gene pH-response regulator protein palA/RIM20 Neighboring gene lysine histidine transporter-like 6 Neighboring gene ATP-dependent Clp protease adapter protein CLPS1, chloroplastic

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_034009.1 Chromosome G1 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mediator of RNA polymerase II transcription subunit 25

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034009.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    29969842..29979396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020571021.1 → XP_020426610.1  mediator of RNA polymerase II transcription subunit 25 isoform X1

    UniProtKB/TrEMBL
    A0A251R5Q9
    Conserved Domains (2) summary
    cl00057
    Location:6 → 226
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl22853
    Location:153 → 369
    Motor_domain; Myosin and Kinesin motor domain

  2. XM_020571026.1 → XP_020426615.1  mediator of RNA polymerase II transcription subunit 25 isoform X2

    UniProtKB/TrEMBL
    A0A251R5Q9, A0A251R8B3
    Conserved Domains (2) summary
    cl00057
    Location:6 → 226
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl22853
    Location:153 → 369
    Motor_domain; Myosin and Kinesin motor domain

  3. XM_020571029.1 → XP_020426618.1  mediator of RNA polymerase II transcription subunit 25 isoform X3

    Conserved Domains (2) summary
    cl00057
    Location:6 → 226
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl22853
    Location:153 → 369
    Motor_domain; Myosin and Kinesin motor domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases