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hs3st2 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [ Rhincodon typus (whale shark) ]

Gene ID: 109936394, updated on 14-Mar-2024

Summary

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Gene symbol
hs3st2
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 2
See related
EnsemblRapid:ENSRTYG00015002129
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
zebrafish all
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Genomic context

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See hs3st2 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
2
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 21 NC_063352.1 (27450735..27514085, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018076330.1 (46421..114580, complement)

Chromosome 21 - NC_063352.1Genomic Context describing neighboring genes Neighboring gene sodium channel epithelial 1 subunit gamma Neighboring gene ubiquitin specific peptidase 31 Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 4-like Neighboring gene lysine (K)-specific demethylase 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 2
Names
heparan sulfate-glucosamine 3-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063352.1 Reference sRhiTyp1.1

    Range
    27450735..27514085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020535002.2 → XP_020390591.1  heparan sulfate glucosamine 3-O-sulfotransferase 2

    Related
    ENSRTYP00015003276.1, ENSRTYT00015003581.1
    Conserved Domains (1) summary
    pfam00685
    Location:114 → 347
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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