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LOC109920942 natural resistance-associated macrophage protein 2-like [ Rhincodon typus (whale shark) ]

Gene ID: 109920942, updated on 30-Nov-2023

Summary

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Gene symbol
LOC109920942
Gene description
natural resistance-associated macrophage protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
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Genomic context

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See LOC109920942 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 7 NC_063338.1 (97676173..97729976)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018041623.1 (50373..110591)

Chromosome 7 - NC_063338.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain phosphoinositide-interacting protein 4-like Neighboring gene insulin-like growth factor-binding protein 4 Neighboring gene rac GTPase-activating protein 1-like Neighboring gene GDP-mannose pyrophosphorylase Aa Neighboring gene chondroitin sulfate synthase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
natural resistance-associated macrophage protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063338.1 Reference sRhiTyp1.1

    Range
    97676173..97729976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048599290.1 → XP_048455247.1  natural resistance-associated macrophage protein 2-like

Nucleotide Protein
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