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chst6 carbohydrate sulfotransferase 6 [ Rhincodon typus (whale shark) ]

Gene ID: 109917678, updated on 14-Mar-2024

Summary

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Gene symbol
chst6
Gene description
carbohydrate sulfotransferase 6
See related
EnsemblRapid:ENSRTYG00015010301
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
zebrafish all
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Genomic context

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See chst6 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 15 NC_063346.1 (24616968..24627078)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018037125.1 (12410..30813, complement)

Chromosome 15 - NC_063346.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase tRNA specific 1 Neighboring gene transmembrane protein 231 Neighboring gene solute carrier family 10 member 3 Neighboring gene IST1 factor associated with ESCRT-III

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfur compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063346.1 Reference sRhiTyp1.1

    Range
    24616968..24627078
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020517530.2 → XP_020373119.1  carbohydrate sulfotransferase 6

    Related
    ENSRTYP00015016044.1, ENSRTYT00015017730.1
    Conserved Domains (1) summary
    pfam13469
    Location:45 → 303
    Sulfotransfer_3; Sulfotransferase family

  2. XM_048605808.1 → XP_048461765.1  carbohydrate sulfotransferase 6

    Related
    ENSRTYP00015016042.1, ENSRTYT00015017728.1

  3. XM_048605809.1 → XP_048461766.1  carbohydrate sulfotransferase 6

    Related
    ENSRTYP00015016041.1, ENSRTYT00015017727.1
Nucleotide Protein
Heading Accession and Version

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