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LOC109913679 torsin-1A-interacting protein 2-like [ Rhincodon typus (whale shark) ]

Gene ID: 109913679, updated on 30-Nov-2023

Summary

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Gene symbol
LOC109913679
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSRTYG00015015241
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
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Genomic context

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See LOC109913679 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 10 NC_063341.1 (6728570..6762700)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018032773.1 (219718..254914)

Chromosome 10 - NC_063341.1Genomic Context describing neighboring genes Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene uncharacterized LOC125484156 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene ADAMTS-like protein 2 Neighboring gene protein FAM163A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063341.1 Reference sRhiTyp1.1

    Range
    6728570..6762700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048602226.1 → XP_048458183.1  torsin-1A-interacting protein 2-like

    Related
    ENSRTYP00015023765.1, ENSRTYT00015026406.1
Nucleotide Protein
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