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poglut1 protein O-glucosyltransferase 1 [ Rhincodon typus (whale shark) ]

Gene ID: 109911835, updated on 14-Mar-2024

Summary

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Gene symbol
poglut1
Gene description
protein O-glucosyltransferase 1
See related
EnsemblRapid:ENSRTYG00015019718
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
human zebrafish all
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Genomic context

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See poglut1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 19 NC_063350.1 (4704064..4727229, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018030915.1 (23182..56521)

Chromosome 19 - NC_063350.1Genomic Context describing neighboring genes Neighboring gene transcription factor-like 5 protein Neighboring gene death-inducer obliterator 1-like Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene angiopoietin-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063350.1 Reference sRhiTyp1.1

    Range
    4704064..4727229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020511210.2 → XP_020366799.2  protein O-glucosyltransferase 1 isoform X2

    Related
    ENSRTYP00015030954.1, ENSRTYT00015034361.1

  2. XM_048608282.1 → XP_048464239.1  protein O-glucosyltransferase 1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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