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LOC109908949 adapter molecule crk-like [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109908949, updated on 14-Dec-2023

Summary

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Gene symbol
LOC109908949
Gene description
adapter molecule crk-like
See related
Ensembl:ENSOKIG00005032875
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC109908949 in Genome Data Viewer
Location:
chromosome: LG18
Exon count:
8
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG18 NC_034191.2 (39178979..39193352, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG18 NC_034191.1 (40302595..40308524)

Linkage Group LG18 - NC_034191.2Genomic Context describing neighboring genes Neighboring gene nucleotide-binding oligomerization domain-containing protein 1-like Neighboring gene unconventional myosin-Ic-like Neighboring gene 14-3-3 protein epsilon Neighboring gene leucine-rich repeat-containing protein 75A Neighboring gene polymerase delta-interacting protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adapter molecule crk-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034191.2 Reference Okis_V2 Primary Assembly

    Range
    39178979..39193352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031796013.1 → XP_031651873.1  adapter molecule crk-like

    UniProtKB/TrEMBL
    A0A8C7IQ88, A0A8C7ISA8
    Related
    ENSOKIP00005076555.1, ENSOKIT00005081578.1
    Conserved Domains (3) summary
    cd09926
    Location:5 → 115
    SH2_CRK_like; Src homology 2 domain found in cancer-related signaling adaptor protein CRK
    cd11758
    Location:134 → 188
    SH3_CRK_N; N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    cd11759
    Location:239 → 295
    SH3_CRK_C; C-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
Nucleotide Protein
Heading Accession and Version

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