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dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109908540, updated on 14-Mar-2024

Summary

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Gene symbol
dpm1
Gene description
dolichyl-phosphate mannosyltransferase subunit 1, catalytic
See related
Ensembl:ENSOKIG00005032660
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See dpm1 in Genome Data Viewer
Location:
chromosome: LG17
Exon count:
9
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG17 NC_034190.2 (57945265..57952063, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG17 NC_034190.1 (51305051..51311653, complement)

Linkage Group LG17 - NC_034190.2Genomic Context describing neighboring genes Neighboring gene partitioning defective 6 homolog beta Neighboring gene activity-dependent neuroprotector homeobox protein Neighboring gene collagen alpha-1(XIV) chain Neighboring gene solute carrier family 35 member C2 Neighboring gene transcription initiation factor TFIID subunit 13 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichol-phosphate mannosyltransferase subunit 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034190.2 Reference Okis_V2 Primary Assembly

    Range
    57945265..57952063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020507193.2 → XP_020362782.1  dolichol-phosphate mannosyltransferase subunit 1-like

    UniProtKB/TrEMBL
    A0A8C7IM28, A0A8C7MSS4
    Related
    ENSOKIP00005075713.1, ENSOKIT00005080647.1
    Conserved Domains (1) summary
    PLN02726
    Location:7 → 250
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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