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LOC109904267 acetylcholine receptor subunit alpha-like [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109904267, updated on 14-Dec-2023

Summary

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Gene symbol
LOC109904267
Gene description
acetylcholine receptor subunit alpha-like
See related
Ensembl:ENSOKIG00005027970
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC109904267 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
9
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG2 NC_034175.2 (43991844..43998170, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG2 NC_034175.1 (42336871..42342413, complement)

Linkage Group LG2 - NC_034175.2Genomic Context describing neighboring genes Neighboring gene secernin-3-like Neighboring gene integral membrane protein GPR155-like Neighboring gene N-chimaerin-like Neighboring gene uncharacterized LOC109866800

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034175.2 Reference Okis_V2 Primary Assembly

    Range
    43991844..43998170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031795231.1 → XP_031651091.1  acetylcholine receptor subunit alpha-like

    UniProtKB/TrEMBL
    A0A8C7HZW1, A0A8C7I4C9
    Related
    ENSOKIP00005065544.1, ENSOKIT00005069679.1
    Conserved Domains (2) summary
    TIGR00860
    Location:4 → 447
    LIC; Cation transporter family protein
    cd19014
    Location:22 → 231
    LGIC_ECD_nAChR_A1; extracellular domain of nicotinic acetylcholine receptor subunit alpha 1 (CHRNA1)
Nucleotide Protein
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