U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109899569 cytokine-inducible SH2-containing protein [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109899569, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109899569
Gene description
cytokine-inducible SH2-containing protein
See related
Ensembl:ENSOKIG00005048144
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109899569 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
3
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG1 NC_034174.2 (46014675..46022297, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG1 NC_034174.1 (26730050..26737634)

Linkage Group LG1 - NC_034174.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 43 Neighboring gene transforming protein RhoA-like Neighboring gene WD repeat-containing protein 82 Neighboring gene uncharacterized LOC109892777 Neighboring gene glutamine-rich protein 1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytokine-inducible SH2-containing protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034174.2 Reference Okis_V2 Primary Assembly

    Range
    46014675..46022297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020494958.2 → XP_020350547.1  cytokine-inducible SH2-containing protein

    UniProtKB/TrEMBL
    A0A8C7KYL7, A0A8C7L1B7
    Related
    ENSOKIP00005110150.1, ENSOKIT00005117973.1
    Conserved Domains (2) summary
    smart00969
    Location:166 → 199
    SOCS_box; The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases
    cd10718
    Location:44 → 131
    SH2_CIS; Src homology 2 (SH2) domain found in cytokine-inducible SH2-containing protein (CIS)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases