U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109892766 delta-sarcoglycan-like [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109892766, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109892766
Gene description
delta-sarcoglycan-like
See related
Ensembl:ENSOKIG00005027523
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109892766 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
9
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG6 NC_034179.2 (36331837..36645588)
100 previous assembly Okis_V1 (GCF_002021735.1) LG6 NC_034179.1 (30064643..30380876)

Linkage Group LG6 - NC_034179.2Genomic Context describing neighboring genes Neighboring gene intelectin-like Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene rho GTPase-activating protein 7 Neighboring gene arginine--tRNA ligase, cytoplasmic-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
delta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034179.2 Reference Okis_V2 Primary Assembly

    Range
    36331837..36645588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020485532.2 → XP_020341121.1  delta-sarcoglycan-like

    UniProtKB/TrEMBL
    A0A8C7HXP1, A0A8C7MMB9
    Related
    ENSOKIP00005064265.1, ENSOKIT00005068303.1
    Conserved Domains (1) summary
    pfam04790
    Location:22 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_020485531.2 → XP_020341120.1  delta-sarcoglycan-like

    UniProtKB/TrEMBL
    A0A8C7HXP1, A0A8C7MMB9
    Conserved Domains (1) summary
    pfam04790
    Location:22 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases