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LOC109883698 solute carrier family 2, facilitated glucose transporter member 1-like [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109883698, updated on 14-Mar-2024

Summary

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Gene symbol
LOC109883698
Gene description
solute carrier family 2, facilitated glucose transporter member 1-like
See related
Ensembl:ENSOKIG00005001831
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
zebrafish all
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Genomic context

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See LOC109883698 in Genome Data Viewer
Location:
chromosome: LG7
Exon count:
10
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG7 NC_034180.2 (54444791..54471275)
100 previous assembly Okis_V1 (GCF_002021735.1) Unplaced Scaffold NW_018091580.1 (63537..95987)

Linkage Group LG7 - NC_034180.2Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 177 Neighboring gene SPARC related modular calcium binding 1 Neighboring gene uncharacterized LOC116374725 Neighboring gene papilin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monosaccharide transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 2, facilitated glucose transporter member 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034180.2 Reference Okis_V2 Primary Assembly

    Range
    54444791..54471275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020475731.2 → XP_020331320.2  solute carrier family 2, facilitated glucose transporter member 1-like

    UniProtKB/TrEMBL
    A0A8C7CRJ3
    Related
    ENSOKIP00005004059.1, ENSOKIT00005004249.1
    Conserved Domains (1) summary
    cl28910
    Location:15 → 457
    MFS; Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases