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LOC109878746 C-terminal-binding protein 2 [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109878746, updated on 14-Dec-2023

Summary

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Gene symbol
LOC109878746
Gene description
C-terminal-binding protein 2
See related
Ensembl:ENSOKIG00005040598
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC109878746 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
12
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG15 NC_034188.2 (24944374..24963651, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) Unplaced Scaffold NW_018089388.1 (210188..231490, complement)

Linkage Group LG15 - NC_034188.2Genomic Context describing neighboring genes Neighboring gene spondin-2-like Neighboring gene uncharacterized LOC116353581 Neighboring gene protein FAM53C Neighboring gene uncharacterized LOC109878752

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1; C-terminal-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034188.2 Reference Okis_V2 Primary Assembly

    Range
    24944374..24963651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031789898.1 → XP_031645758.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C7JW67, A0A8C7JZX5
    Related
    ENSOKIP00005093178.1, ENSOKIT00005099536.1

  2. XM_031789899.1 → XP_031645759.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C7GC20, A0A8C7JW42
    Related
    ENSOKIP00005093205.1, ENSOKIT00005099576.1

  3. XM_031789900.1 → XP_031645760.1  C-terminal-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C7JW67
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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