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LOC109875056 dnaJ homolog subfamily B member 6 [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109875056, updated on 25-Jan-2024

Summary

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Gene symbol
LOC109875056
Gene description
dnaJ homolog subfamily B member 6
See related
Ensembl:ENSOKIG00005025992
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC109875056 in Genome Data Viewer
Location:
chromosome: LG30
Exon count:
10
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG30 NC_034203.2 (22620750..22630233)
100 previous assembly Okis_V1 (GCF_002021735.1) LG30 NC_034203.1 (23646470..23655017)

Linkage Group LG30 - NC_034203.2Genomic Context describing neighboring genes Neighboring gene canopy FGF signaling regulator 1 Neighboring gene tiggy-winkle hedgehog protein-like Neighboring gene transient receptor potential cation channel subfamily A member 1-like Neighboring gene potassium voltage-gated channel subfamily B member 2-like Neighboring gene transmembrane protein 70, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034203.2 Reference Okis_V2 Primary Assembly

    Range
    22620750..22630233
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020467203.2 → XP_020322792.1  dnaJ homolog subfamily B member 6

    UniProtKB/TrEMBL
    A0A8C7HM55, A0A8C7HPD7
    Related
    ENSOKIP00005060587.1, ENSOKIT00005064407.1
    Conserved Domains (1) summary
    PRK10767
    Location:4 → 139
    PRK10767; chaperone protein DnaJ; Provisional
Nucleotide Protein
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