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LOC109873060 C-terminal-binding protein 1-like [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109873060, updated on 14-Dec-2023

Summary

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Gene symbol
LOC109873060
Gene description
C-terminal-binding protein 1-like
See related
Ensembl:ENSOKIG00005037784
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC109873060 in Genome Data Viewer
Location:
chromosome: LG28
Exon count:
12
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG28 NC_034201.2 (43126148..43145293)
100 previous assembly Okis_V1 (GCF_002021735.1) LG28 NC_034201.1 (9828561..9842269, complement)

Linkage Group LG28 - NC_034201.2Genomic Context describing neighboring genes Neighboring gene zinc finger, matrin-type 2 Neighboring gene protein FAM53C-like Neighboring gene stem-loop binding protein 2 Neighboring gene uncharacterized LOC109873052 Neighboring gene uncharacterized LOC116358091

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1-like; C-terminal-binding protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034201.2 Reference Okis_V2 Primary Assembly

    Range
    43126148..43145293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031807969.1 → XP_031663829.1  C-terminal-binding protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A8C7JCR1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_031807971.1 → XP_031663831.1  C-terminal-binding protein 1-like isoform X3

    UniProtKB/TrEMBL
    A0A8C7JCR1
    Related
    ENSOKIP00005086777.1, ENSOKIT00005092805.1
    Conserved Domains (1) summary
    cd05299
    Location:5 → 323
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_020464574.2 → XP_020320163.1  C-terminal-binding protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A8C7JCR1
    Related
    ENSOKIP00005086639.1, ENSOKIT00005092666.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_031807970.1 → XP_031663830.1  C-terminal-binding protein 1-like isoform X2

    UniProtKB/TrEMBL
    A0A8C7JCR1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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