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pfkla phosphofructokinase, liver a [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109870961, updated on 14-Mar-2024

Summary

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Gene symbol
pfkla
Gene description
phosphofructokinase, liver a
See related
Ensembl:ENSOKIG00005045463
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
zebrafish all
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Genomic context

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See pfkla in Genome Data Viewer
Location:
chromosome: LG26
Exon count:
22
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG26 NC_034199.2 (51721874..51781977, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG26 NC_034199.1 (42958118..43021243)

Linkage Group LG26 - NC_034199.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116357720 Neighboring gene transmembrane protein 169b Neighboring gene mitogen-activated protein kinase kinase kinase 13 Neighboring gene titin homolog Neighboring gene transient receptor potential cation channel, subfamily M, member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 6-phosphofructokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructose-6-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical glycolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose 1,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 6-phosphofructokinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent 6-phosphofructokinase, liver type-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034199.2 Reference Okis_V2 Primary Assembly

    Range
    51721874..51781977 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020461684.2 → XP_020317273.2  ATP-dependent 6-phosphofructokinase, liver type-like

    UniProtKB/TrEMBL
    A0A8C7KPI8
    Related
    ENSOKIP00005104460.1, ENSOKIT00005111950.1
    Conserved Domains (1) summary
    cd00764
    Location:11 → 771
    Eukaryotic_PFK; Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent ...
Nucleotide Protein
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